PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008239499.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 170aa    MW: 19521.9 Da    PI: 9.7455
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008239499.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.33.3e-3391149159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s+fprsYYrCt++gC vkk+v+r ++d+++v++tYeg H h+
  XP_008239499.1  91 LDDGYRWRKYGQKTVKNSKFPRSYYRCTHQGCVVKKQVQRLSKDEEIVVTTYEGIHSHP 149
                     59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-3376149IPR003657WRKY domain
SuperFamilySSF1182905.36E-3083150IPR003657WRKY domain
PROSITE profilePS5081129.73586151IPR003657WRKY domain
SMARTSM007741.2E-3891150IPR003657WRKY domain
PfamPF031065.1E-2792149IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MEHNQILFLA LPKSSDSASP NLPSNPSNIS QVFPRFHFDS AGLMKNEAKI YQHCGTSYGS  60
VDKMKSGKKE GGKETKKHKY AFQTRSQVDI LDDGYRWRKY GQKTVKNSKF PRSYYRCTHQ  120
GCVVKKQVQR LSKDEEIVVT TYEGIHSHPT DETSAENFDQ ILRHLQTYNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A4e-2781148774Probable WRKY transcription factor 4
1wj2_A4e-2781148774Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008239499.11e-127PREDICTED: probable WRKY transcription factor 43
SwissprotQ9FYA22e-47WRK75_ARATH; Probable WRKY transcription factor 75
TrEMBLM5WAY91e-114M5WAY9_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g01280.t015e-56(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF115634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-47WRKY DNA-binding protein 75